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Oncogene Software

Internal software

We are developing automatic tools for analyzing an visualizing the experimental data produced by the Oncogene consortium. In the future, you will be able to download these applications here.

Links to external software for analysis of cancer genetic data:

Segmentation of DNA copy number data, with various algorithms: CGHweb
Methods for identification of important copy number aberrations in cancer: GISTIC, RAE
Integrated viewer for copy number data, gene expression, epigenetic modifications, etc.: IGV viewer

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